Andrew Fire: search on Z-Library

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1

Recognition and Silencing of Repeated DNA

Hsieh, Jenny, Fire, Andrew

Journal:

Annual Review of Genetics

Year:

2000

Language:

english

File:

PDF, 100 KB

english, 2000

2

10.1038/35888

Fire, Andrew, Xu, SiQun, Montgomery, Mary K., Kostas, Steven A., Driver, Samuel E., Mello, Craig C.

Journal:

Year:

1998

Language:

english

File:

PDF, 401 KB

english, 1998

3

Minicircle DNA Vectors Achieve Sustained Expression Reflected by Active Chromatin and Transcriptional Level

Gracey Maniar, Lia E., Maniar, Jay M., Chen, Zhi-Ying, Lu, Jiamiao, Fire, Andrew Z., Kay, Mark A.

Journal:

Molecular Therapy

Year:

2013

Language:

english

File:

PDF, 408 KB

english, 2013

4

Ribosome clearance during RNA interference

Pule, Makena N, Glover, Marissa L, Fire, Andrew Z, Arribere, Joshua A

Journal:

Year:

2019

Language:

english

File:

PDF, 1.25 MB

english, 2019

5

CeMyoD accumulation defines the body wall muscle cell fate during C. elegans embryogenesis

Michael Krause, Andrew Fire, Susan White Harrison, James Priess, Harold Weintraub

Journal:

Year:

1990

Language:

english

File:

PDF, 5.76 MB

english, 1990

6

RNA Interference Technology (From Basic Science to Drug Development) || Dicer in RNAi: Its roles in vivo and utility in vitro

Appasani, Krishnarao, Fire, Andrew, Nirenberg, Marshall

Year:

2005

Language:

english

File:

PDF, 1.04 MB

english, 2005

7

RNA Interference Technology (From Basic Science to Drug Development) || Delivering siRNA in vivo for functional genomics and novel therapeutics

Appasani, Krishnarao, Fire, Andrew, Nirenberg, Marshall

Year:

2005

Language:

english

File:

PDF, 527 KB

english, 2005

8

Rolling Replication of Short DNA Circles

Andrew Fire and Si-Qun Xu

Journal:

Proceedings of the National Academy of Sciences

Year:

1995

Language:

english

File:

PDF, 519 KB

english, 1995

9

The rde-1 Gene, RNA Interference, and Transposon Silencing in C. elegans

Hiroaki Tabara, Madathia Sarkissian, William G Kelly, Jamie Fleenor, Alla Grishok, Lisa Timmons, Andrew Fire, Craig C Mello

Journal:

Year:

1999

Language:

english

File:

PDF, 264 KB

english, 1999

10

Functional Anatomy of a dsRNA Trigger: Differential Requirement for the Two Trigger Strands in RNA Interference

Susan Parrish, Jamie Fleenor, SiQun Xu, Craig Mello, Andrew Fire

Journal:

Year:

2000

Language:

english

File:

PDF, 1.21 MB

english, 2000

11

Persistence and evolution of allergen-specific IgE repertoires during subcutaneous specific immunotherapy

Levin, Mattias, King, Jasmine J., Glanville, Jacob, Jackson, Katherine J.L., Looney, Timothy J., Hoh, Ramona A., Mari, Adriano, Andersson, Morgan, Greiff, Lennart, Fire, Andrew Z., Boyd, Scott D., Ohl

Journal:

Journal of Allergy and Clinical Immunology

Year:

2015

Language:

english

File:

PDF, 1.08 MB

english, 2015

12

RNA Interference Technology (From Basic Science to Drug Development) || High-throughput RNAi by soaking in Caenorhabtis elegans

Appasani, Krishnarao, Fire, Andrew, Nirenberg, Marshall

Year:

2005

Language:

english

File:

PDF, 470 KB

english, 2005

13

Conserved Translatome Remodeling in Nematode Species Executing a Shared Developmental Transition

Stadler, Michael, Fire, Andrew, Copenhaver, Gregory P.

Journal:

Year:

2013

Language:

english

File:

PDF, 3.13 MB

english, 2013

14

Circulomics: The Structural Genomics of Endogenous and Exogenous Extrachromosomal Circular DNAs

Levene, Stephen D., Shoura, Massa J., Fire, Andrew Z.

Journal:

Biophysical Journal

Year:

2018

Language:

english

File:

PDF, 44 KB

english, 2018

15

An Extensive Meta-Metagenomic Search Identifies SARS-CoV-2-Homologous Sequences in Pangolin Lung Viromes

Wahba, Lamia, Jain, Nimit, Fire, Andrew Z., Shoura, Massa J., Artiles, Karen L., McCoy, Matthew J., Jeong, Dae-Eun, Imperiale, Michael J.

Journal:

Year:

2020

File:

PDF, 1.49 MB

2020

16

The Extragenic Spacer Length Between the 5′ and 3′ Ends of the Transgene Expression Cassette Affects Transgene Silencing From Plasmid-based Vectors

Lu, Jiamiao, Zhang, Feijie, Xu, Siqun, Fire, Andrew Z, Kay, Mark A

Journal:

Molecular Therapy

Year:

2012

Language:

english

File:

PDF, 874 KB

english, 2012

17

Nonsense mRNA suppression via nonstop decay

Arribere, Joshua A, Fire, Andrew Z

Journal:

Year:

2018

Language:

english

File:

PDF, 4.83 MB

english, 2018

18

Amplification of siRNA in Caenorhabditis elegans generates a transgenerational sequence-targeted histone H3 lysine 9 methylation footprint

Gu, Sam Guoping, Pak, Julia, Guang, Shouhong, Maniar, Jay M, Kennedy, Scott, Fire, Andrew

Journal:

Nature Genetics

Year:

2012

Language:

english

File:

PDF, 1.54 MB

english, 2012

19

Genes and Mechanisms Related to RNA Interference Regulate Expression of the Small Temporal RNAs that Control C. elegans Developmental Timing

Alla Grishok, Amy E. Pasquinelli, Darryl Conte, Na Li, Susan Parrish, Ilho Ha, David L. Baillie, Andrew Fire, Gary Ruvkun, Craig C. Mello

Journal:

Year:

2001

Language:

english

File:

PDF, 466 KB

english, 2001

20

Target-dependent nickase activities of the CRISPR–Cas nucleases Cpf1 and Cas9

Fu, Becky Xu Hua, Smith, Justin D., Fuchs, Ryan T., Mabuchi, Megumu, Curcuru, Jennifer, Robb, G. Brett, Fire, Andrew Z.

Journal:

Nature Microbiology

Year:

2019

File:

PDF, 2.23 MB

2019

21

Stabilization of dense Antarctic water supply to the Atlantic Ocean overturning circulation

Abrahamsen, E. Povl, Meijers, Andrew J. S., Polzin, Kurt L., Naveira Garabato, Alberto C., King, Brian A., Firing, Yvonne L., Sallée, Jean-Baptiste, Sheen, Katy L., Gordon, Arnold L., Huber, Bruce A.,

Journal:

Nature Climate Change

Year:

2019

Language:

english

File:

PDF, 1.64 MB

english, 2019

22

Intron and gene size expansion during nervous system evolution

McCoy, Matthew J., Fire, Andrew Z.

Journal:

Year:

2020

File:

PDF, 3.45 MB

2020

23

A modular set of lacZ fusion vectors for studying gene expression in Caenorhabditis elegans

Fire, Andrew, Harrison, Susan White, Dixon, Dennis

Journal:

Year:

1990

Language:

english

File:

PDF, 1.96 MB

english, 1990

24

Competition between ADAR and RNAi pathways for an extensive class of RNA targets

Wu, Diane, Lamm, Ayelet T, Fire, Andrew Z

Journal:

Nature Structural and Molecular Biology

Year:

2011

Language:

english

File:

PDF, 1.08 MB

english, 2011

25

[ACM Press the eighth annual international conference - San Diego, California, USA (2004.03.27-2004.03.31)] Proceedings of the eighth annual international conference on Computational molecular biology - RECOMB '04 - RNAi, genome ultrastructure, and other unexpected tales from the analysis of genetic silencing

Year:

2004

Language:

english

File:

PDF, 86 KB

english, 2004

26

On the nature of in vivo requirements for rde-4 in RNAi and developmental pathways in C. elegans

Blanchard, Daniel, Parameswaran, Poornima, Lopez-Molina, Javier, Gent, Jonathan, Saynuk, Jamie Fleenor, Fire, Andrew

Journal:

Year:

2011

Language:

english

File:

PDF, 1005 KB

english, 2011

27

RNA-triggered gene silencing

Journal:

Trends in Genetics

Year:

1999

Language:

english

File:

PDF, 223 KB

english, 1999

28

Integrative transformation of Caenorhabditis elegans

Journal:

The EMBO Journal

Year:

1986

Language:

english

File:

PDF, 2.30 MB

english, 1986

29

Epidemiology, molecular, and genetic methodologies to evaluate causes of CKDu around the world: report of the Working Group from the ISN International Consortium of Collaborators on CKDu

Anand, Shuchi, Caplin, Ben, Gonzalez-Quiroz, Marvin, Schensul, Stephen L., Bhalla, Vivek, Parada, Xavier, Nanayakkara, Nishantha, Fire, Andrew, Levin, Adeera, Friedman, David J., Aguilar-Gonzalez, Ang

Journal:

Kidney International

Year:

2019

Language:

english

File:

PDF, 163 KB

english, 2019

30

Discovery of SARxxxx92, a pan-PIM kinase Inhibitor, efficacious in a KG1 tumor model

Barberis, Claude, Erdman, Paul, Czekaj, Mark, Fire, Luke, Pribish, James, Tserlin, Elina, Maniar, Sachin, Batchelor, Joseph D., Liu, Jinyu, Patel, Vinod F., Hebert, Andrew, Levit, Mikhail, Wang, Anlai

Journal:

Bioorganic & Medicinal Chemistry Letters

Year:

2020

File:

PDF, 1.53 MB

2020

31

Evolutionary Conservation of MyoD Function and Differential Utilization of E Proteins

Jian-Min Zhang, Lihsia Chen, Michael Krause, Andrew Fire, Bruce M Paterson

Journal:

Developmental Biology

Year:

1999

Language:

english

File:

PDF, 184 KB

english, 1999

32

4.11 High-Throughput VDJ Sequencing for Chronic Lymphocytic Leukemia: Minimal Residual Disease Quantification and Immunoglobulin Repertoire Assessment Following Hematopoietic Cell Transplantation

Aaron C. Logan, Hong Gao, Chunlin Wang, Bita Sahaf, Carol D. Jones, Eleanor L. Marshall, Ismael Buño, Randall Armstrong, Andrew Z. Fire, Kenneth I. Weinberg, Michael Mindrinos, James L. Zehnder, Scott

Journal:

Clinical Lymphoma Myeloma and Leukemia

Year:

2011

Language:

english

File:

PDF, 81 KB

english, 2011

33

Co-evolution of a broadly neutralizing HIV-1 antibody and founder virus

Liao, Hua-Xin, Lynch, Rebecca, Zhou, Tongqing, Gao, Feng, Alam, S. Munir, Boyd, Scott D., Fire, Andrew Z., Roskin, Krishna M., Schramm, Chaim A., Zhang, Zhenhai, Zhu, Jiang, Shapiro, Lawrence, Becker,

Journal:

Year:

2013

Language:

english

File:

PDF, 1.86 MB

english, 2013

34

[Part 2: Biological Sciences] || DNA-Dependent Transcription of Adenovirus Genes in a Soluble Whole-Cell Extract

James L. Manley, Andrew Fire, Amparo Cano, Phillip A. Sharp and Malcolm L. Gefter

Journal:

Proceedings of the National Academy of Sciences

Year:

1980

Language:

english

File:

PDF, 1.61 MB

english, 1980

35

Nucleic acid structure and intracellular immunity: some recent ideas from the world of RNAi

Journal:

Quarterly Reviews of Biophysics

Year:

2005

Language:

english

File:

PDF, 63 KB

english, 2005

36

Anin vitro-identified high-affinity nucleosome-positioning signal is capable of transiently positioning a nucleosomein vivo

Lia E Gracey, Zhi-Ying Chen, Jay M Maniar, Anton Valouev, Arend Sidow, Mark A Kay, Andrew Z Fire

Journal:

Epigenetics & Chromatin

Year:

2010

Language:

english

File:

PDF, 1.09 MB

english, 2010

37

A Requirement for ERK-Dependent Dicer Phosphorylation in Coordinating Oocyte-to-Embryo Transition in C. elegans

Drake, Melanie, Furuta, Tokiko, Suen, Kin Man, Gonzalez, Gabriel, Liu, Bin, Kalia, Awdhesh, Ladbury, John E., Fire, Andrew Z., Skeath, James B., Arur, Swathi

Journal:

Developmental Cell

Year:

2014

Language:

english

File:

PDF, 4.86 MB

english, 2014

38

Distinct patterns of Cas9 mismatch tolerance in vitro and in vivo

Fu, Becky X.H., St. Onge, Robert P., Fire, Andrew Z., Smith, Justin D.

Journal:

Nucleic Acids Research

Year:

2016

Language:

english

File:

PDF, 1.30 MB

english, 2016

39

Clonality: Point estimation

Tian, Lu, Liu, Yi, Fire, Andrew Z., Boyd, Scott D., Olshen, Richard A.

Journal:

The Annals of Applied Statistics

Year:

2019

Language:

english

File:

PDF, 594 KB

english, 2019

40

Capped small RNAs and MOV10 in human hepatitis delta virus replication

Haussecker, Dirk, Cao, Dan, Huang, Yong, Parameswaran, Poornima, Fire, Andrew Z, Kay, Mark A

Journal:

Nature Structural and Molecular Biology

Year:

2008

Language:

english

File:

PDF, 542 KB

english, 2008

41

On the Role of RNA Amplification in dsRNA-Triggered Gene Silencing

Titia Sijen, Jamie Fleenor, Femke Simmer, Karen L. Thijssen, Susan Parrish, Lisa Timmons, Ronald H.A. Plasterk, Andrew Fire

Journal:

Year:

2001

Language:

english

File:

PDF, 1.31 MB

english, 2001

42

dsRNA-mediated gene silencing in cultured Drosophila cells: a tissue culture model for the analysis of RNA interference

Natasha J. Caplen, Jamie Fleenor, Andrew Fire, Richard A. Morgan

Journal:

Year:

2000

Language:

english

File:

PDF, 444 KB

english, 2000

43

Ingestion of bacterially expressed dsRNAs can produce specific and potent genetic interference in Caenorhabditis elegans

Lisa Timmons, Donald L. Court, Andrew Fire

Journal:

Year:

2001

Language:

english

File:

PDF, 729 KB

english, 2001

44

Epidemiology, molecular, and genetic methodologies to evaluate causes of CKDu around the world: report of the Working Group from the ISN International Consortium of Collaborators on CKDu

Anand, Shuchi, Caplin, Ben, Gonzalez-Quiroz, Marvin, Schensul, Stephen L., Bhalla, Vivek, Parada, Xavier, Nanayakkara, Nishantha, Fire, Andrew, Levin, Adeera, Friedman, David J., Aguilar-Gonzalez, Ang

Journal:

Kidney International

Year:

2019

File:

PDF, 163 KB

2019

45

Transcription polymeraseâcatalyzed emergence of novel RNA replicons

Jain, Nimit, Blauch, Lucas R., Szymanski, Michal R., Das, Rhiju, Tang, Sindy K. Y., Yin, Y. Whitney, Fire, Andrew Z.

Journal:

Year:

2020

Language:

english

File:

PDF, 1.77 MB

english, 2020

46

Cyclin D involvement demarcates a late transition in C. elegans embryogenesis

Judith Yanowitz, Andrew Fire

Journal:

Developmental Biology

Year:

2005

Language:

english

File:

PDF, 556 KB

english, 2005

47

Inhibition of transcription factor activity by poliovirus

Samuels, Mark, Sharp, Phillip A., Baltimore, David, Crawford, Nigel, Fire, Andrew

Journal:

Year:

1981

Language:

english

File:

PDF, 1.96 MB

english, 1981

48

Sequence-Modified Antibiotic Resistance Genes Provide Sustained Plasmid-Mediated Transgene Expression in Mammals

Lu, Jiamiao, Zhang, Feijie, Fire, Andrew Z., Kay, Mark A.

Journal:

Molecular Therapy

Year:

2017

Language:

english

File:

PDF, 2.15 MB

english, 2017

49

Intricate and Cell-type-specific Populations of Endogenous Circular DNA (eccDNA) in Caenorhabditis elegans and Homo sapiens

Shoura, Massa J., Gabdank, Idan, Hansen, Loren, Merker, Jason, Gotlib, Jason, Levene, Stephen D., Fire, Andrew Z.

Journal:

G3 Genes|Genome|Genetics

Year:

2017

Language:

english

File:

PDF, 1.78 MB

english, 2017

50

Caenorhabditis elegans Levamisole Resistance Genes lev-1 , unc-29 , and unc-38 Encode Functional Nicotinic Acetylcholine Receptor Subunits

Fleming, John T., Squire, Michael D., Barnes, Thomas M., Tornoe, Camilla, Matsuda, Kazuhiko, Ahnn, Joohong, Fire, Andrew, Sulston, John E., Barnard, Eric A., Sattelle, David B., Lewis, James A.

Journal:

Journal of Neuroscience

Year:

1997

Language:

english

File:

PDF, 1.12 MB

english, 1997

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